Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKNAYAK----SGVDVEAGYEVVERIKKHVARTERAGVMGALGGFGGMFDLSQTGVKEPVLISGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYVA--TGKNEPAKLEQVVAGVAEGCVQAGAALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVKEGDILLGLASSGIHSNGYSLVRRVFADYTGDEVLPELEGKQLKDVLLEPTRIYVKAALPLIKEELVNGIAHITGGGFIENVPRMFAD-DLAAEIDEDKVPVLPIFKALEKYGDI---------------------KHEEMFEIFNMGVGLMLAVSPENVNRVKELLDE---PVYEIGRIIKKADASVVIK |
| 2YYE Chain:A ((3-345)) | GGIMVELLKLVRSSGCAAKVGPGDLQEILKGFNIYTDESTLVSIGDDAGVYEHN-----------GIIWVYTVDIITPVVNDPYLWGAISTANALSDVYAMGGIPVNALAISCFNNCELDIEIFREVIRGALDKLREAKTVLLGGHTID------DKEPKFGLSVAGICPEGKYITQSGAQVGQLLILT-----KPIGTGILIKGLK--------EGILKEEDINEAIENMLALNDKARNLMLSLDATACTDVTGFGLLGHAWNICKNSNIGARIFFEKVPYYQLSENLVKKKIYPKGAIENLNFVKNYLKSNLDNWKLILLSDPVTSGGLLFTINKEKLEKIDETAKELEVNYWIIGETIAENVLEVL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156446 for 2598 contacts (-60.2/contact) +
2D Compatibility (PS) -32135 + (NN) -2374 + (LL) 1468
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -202537.0 ( -77.96 by residue)
QMean score : 0.394
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