Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLEKINETRDFLQAKGV-TAPEFGLILGSGLGELAEEIEN-PIVVDYADIPNWGQSTVVGHAGKLVYGDLSGRKVLALQGRFHFYEGNTMEIVTF---PVRIMRALACHSVLVTNAAGGIG--YGPGTLMLIKDHINVIGTNPLIGENLEEFGPRFPDMSDAYTATYRQKAHQIAEKQNIKLEEGVYLGVSGPTYETPAEIRAFQTMGAQAVGMSTVPEVIVAAHSGLKVLGISAITNFAAGFQ-SELNHEEVVEVTQRIKEDFKGLVKSLVAEL
1G2O Chain:A ((10-268))
----ELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEG---HDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTARSPL-------VGGEFVDLTDAYSPRLRELARQSD----PQLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITGEPLSHAEVLAAGAASATRMGALLADVIARF
General information:
TITO was launched using:
RESULT:
Template:
1G2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168380 for 2206 contacts (-76.3/contact) +
2D Compatibility (PS) -26279 + (NN) -6055 + (LL) 1440
1D Compatibility (HY) -16800 + (ID) 4800
Total energy: -220874.0 ( -100.12 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1G2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2O-query.scw
PDB file :
Tito_Scwrl_1G2O.pdb
: