Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLT-DPNMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGQFVKVSAEREPANIDWATDGVEIVLEATGFFASKEKAEQHIHENGAKKVVITAPGGNDVKTVVFNTNH-DILDGTETVISGASCTTNCLAPMAKALQDNFGVKQGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVATLEKDVTVEEVNAAMKAAA----NDSYGYTEDPIVSSDIVGISYGSLFDATQTKVQTVDGNQLVKVVSWYDNEMSYTSQLVRTLEYFAKIAK |
| 3CPS Chain:A ((18-353)) | --GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSG-DLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKG-GAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKG-DWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACI---ALNDSFVKLISWYDNESGYSNRLVDLAVYVASRGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CPS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143426 for 2903 contacts (-49.4/contact) +
2D Compatibility (PS) -35144 + (NN) -10997 + (LL) 340
1D Compatibility (HY) -30400 + (ID) 7700
Total energy: -227327.0 ( -78.31 by residue)
QMean score : 0.442
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