Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGDIQLKNRVVLAPMAGVCNSAFRLTVKE-------FGAGLVCAEMVSDKAILYNNARTMGMLYIDEREKPLSLQIFGGKKETLVE-AAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAV--NKPVTVKMRMGWDEDHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTA-NWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKMAVCKLHLDRLIDLKGEN----VAVREMRKHAAWYLKGVKGNANVRNEINHCETREEFVQLLDAFTVEVEAKELQNAKVG |
| 4BFA Chain:A ((22-338)) | --------ASMRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWG--VDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGE-KKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-NLSRVVKYNEP---------RMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146722 for 2581 contacts (-56.8/contact) +
2D Compatibility (PS) -32327 + (NN) -12095 + (LL) 2440
1D Compatibility (HY) -18800 + (ID) 4200
Total energy: -211704.0 ( -82.02 by residue)
QMean score : 0.570
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