Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMSLFQNMKSKLLPIAAVSVLTAGIFAGAELQQTEKASAKKQDKAEIRNVIVMIGDGMGTPYIRAYRSMKNNGDT-PNNPKLTEFDRNLTGMM-MTHPDDPDYNITDSAAAGTALATGVKTYNNAIGVDKN----------GKKVKSVLEEAKQQGKSTGLVATSEINHATPAAYGAHNESRKNMD--------------QIANSYMDDKIKGKHKIDVLLGGGKSYFNRKD-------------------RNLTKEF--KQAGYSYVTTKQALKKN----KDQQVLGLFADGGLAKALDRD-SKTPSLKDMTVSAIDRLNQNKKGFFLMVEGSQIDWAAHDNDTVGAMSEVKDFEQAYKAAIEFAKKDKHTLVIATADHTTGGFTIGANG-----EKNWHAEPILSAKKTPEFMAKKISEGKPVKDVL-ARYANLKVTSEEIKSVEAAAQADKSKGASKAIIKIFNTRSNSGWTSTDHTGEEVPVYAYGPGKEKFRGLINNTDQANIIFKILKTGK
1ZED Chain:A ((28-469))-------------------------------------------PAQTAAKNLIIFLGDGMGVSTVTAARILKGQKKDKLGPEIPLAMDRFPYVALSKTYNV--DKHVPDSGATATAYLCGVKGNFQTIGLSAAARFNQCNTTRGNEVISVMNRAKKAGKSVGVVTTTRVQHASPAGTYAHTVNRNWYSDADVPASARQEGCQDIATQLISN-----MDIDVILGGGRKYMFRMGTPDPEYPDDYSQGGTRLDGKNLVQEWLAKRQGARYVWNRTELMQASLDPSVTHLMGLFEPGDMKYEIHRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTS-EEDTLSLVTADHSHV-FSFGGYPLRGSSIFGLAPGKARDRKAYTVLLYGN------GPGYVLKDGARPDVTESES------------------GSPEYRQQSAVPLDEETHAGEDVAVFARGPQAHLVHGVQEQTFIAHVMAFAACLE-


General information:
TITO was launched using:
RESULT:

Template: 1ZED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2622 -101513 -38.72 -264.36
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -38.72
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_1ZED.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZED-query.scw
PDB file : Tito_Scwrl_1ZED.pdb: