Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMS-KQMRFDNS--EVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQ------------EDGTIGHAYGFQLGKKNRSL-------NGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDDLDAMSLTPCVYETQWYVKH------GKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYNFTIDDFKLINYKHGDKLLFEVAV
1F28 Chain:A ((3-297))-NAEEQQYLNLVQYIINHGEDRP--DRT-GT-----G--TLSVFAPSPLKFSLRNKTFPLLTTKRVFIRGVIEELLWFIRGET-DSLKLREKNIHIWDANGSREYLDSIGLTKRQEGDLGPIYGFQWRHFGAEYIDCKTNYIGQGVDQLANIIQKIRTSPYDRRLILSAWNPADLEKMALPPCHMFCQFYVHIPSNNHRPELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVCDLDPGDFIHVMGDCHIYKDHIEALQQQLTRSPRPFPTLSLNRSITDIEDFTLDDFNIQNYHPYETIKMKMSI


General information:
TITO was launched using:
RESULT:

Template: 1F28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1333 6176 4.63 23.13
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 4.63
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_1F28.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F28-query.scw
PDB file : Tito_Scwrl_1F28.pdb: