Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLEEKTIAKEQIFSGKVIDLYVEDVELPNGKASKREIVKHPGAVAVLAVTDEG-KIIMVKQFRKPLERTIVEIPAGKLEKGEEPEYTALRELEEETGYTAKKLTKITAFYTSPGFADEIVHVFLAEELSVLEEKRELDEDEFVEVMEVTLEDALKLVESREVYDAKTAYAIQYLQLKEALQAQK
5C7Q Chain:A ((1-180))MKHLEEKTLSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILHPGAAMMIPLL-PNGNVVMIHQYRHAVKKVFLEFPAGKRDHNEETLLTAKRELLEETGYEAKDWKFLTTIHPVIGYSNEHIDLYLARDLTHL--EQRLDQGEFIEVVEVKPADLMQLVLEGKVSDVKTQIGAFWLDKFLRGE---


General information:
TITO was launched using:
RESULT:

Template: 5C7Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 780 -14329 -18.37 -80.05
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -18.37
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_5C7Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C7Q-query.scw
PDB file : Tito_Scwrl_5C7Q.pdb: