Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENVFDYEDIQLIPAKCIVNSRSECDTSVRLG-GHTFKLPVVPANMQTIIDEKLAISLAENGYFYVMHRF-EPE---TRIDFIKDMNARGLFSSISVGVKDEEYEFVRQLAEENLTPEYVTIDIAHGHSNAVIEMIQHLKKHLPDSFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKA---ASKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESPGQTIEKDGKLYKEYFGSAS--EFQKGEKKNVEGKKMHVAHKGSIKDTLIEMEQDLQSSISYAGGTKLNAIRN-VDYVIVKNSIFNGDKY
4X3Z Chain:A ((11-350))-KEALTFDDVLLVPAHSTVL-PNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKISGGLRVGAAVGAA--PGNEERVKALVEAG--VDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVP--QITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMS----LVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVRISGAGMKESH-


General information:
TITO was launched using:
RESULT:

Template: 4X3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1979 23364 11.81 74.65
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 11.81
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_4X3Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X3Z-query.scw
PDB file : Tito_Scwrl_4X3Z.pdb: