Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNVAIVGDGGHGKVIRELINARSDTRLAAVLDDKFKTFEGGKEWYTGPPKAVTELRRLIPDVLFLIAVGNNSVRKQLAERLGLGKDDFITLIHPSAIVSKSAVI--GEGTVIMAGAIIQADARIGAHCIINTGAVAEHDNQISDYVHLSPRATLSGAVSVQEGAHVGTGASVIPQIIIGAWSIVGAGSAVIRSIPDRVTAAGAPARIISSIQTSNKG
3BFP Chain:A ((1-194))ARTEKIYIYGGHGLVCEDVAKNMGYKECIFLDSTL-------------------------PKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRM---------


General information:
TITO was launched using:
RESULT:

Template: 3BFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1081 -96240 -89.03 -528.79
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -89.03
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_3BFP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BFP-query.scw
PDB file : Tito_Scwrl_3BFP.pdb: