Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLSTAFSQMFGIDYPIVSAPMDLIAGGELAAAVSGAGGLGLIGGGYGDRDWLARQFDLAAG---APVGCGFITWSLARQ-------------------------------------PQLLDLALQYEPVAVMLSFGDP-AVFADAIKSAGTRLVCQIQNRTQAERALQVGADVLVAQGTEAGGHGHGP-------R-STLTLVPEIVDLVTARGTDIPVIAAGGIADGRGLAAALMLGAAGVLVGTRFYATVEALSTPQARDPLLAATGDDMCRTTIYDQLRRYPWPQGHTMSVLSNALTDQFEDTELDILH---RE-EAMARYW-RAVAARDYSIANVTAGQAAGLVNAVLPAADVITGMAQQAARTLTAMRAV |
| 4QIT Chain:A ((7-356)) | --MTDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGSRGVFEPERGDAAIGTLALVRLLAARG-S----LPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMS---------GRSARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALAREL-PAAELLRTLVEELR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227110 for 2599 contacts (-87.4/contact) +
2D Compatibility (PS) -32346 + (NN) -14765 + (LL) 2284
1D Compatibility (HY) -8800 + (ID) 4600
Total energy: -285337.0 ( -109.79 by residue)
QMean score : 0.425
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