Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDNTIQWDKDADGIVTLTMDDPSGSTNVMNEAYIESMGKAVDRLVAEKDSITGVVVASAKKTFFAGGDVKTMIQARPEDAGDVFNTVETIKRQLRTLETLGKPVVAAINGAALGGGLEIALACHHRIAADVKGSQLGLPEVTLGLLPGGGGVTRTVRMFGIQNAFVSVLAQGTRFKPAKAKEIGLVDELVATVEELVPAAKAWIKEELKANPDGAGVQPWDK-K-----GYKMPGGTPSSPGLAAILPSFPSNLRKQLKGAPMPAPRAILAAAVEGAQVDFDTASRIESRYFASLVTGQVAKNMMQAFFFDLQAINAGGSRP----EGIGKTPIKRIGVLGAGMMGAGIAYVSAKAGYEVVLKDVSLEAAAKGKGYSEKLEAKALERGRTTQERSDALLARITPTADAADFKGVDFVIEAVFENQELKHKVFGEIEDIVEPNAILGSNTSTLPITGLATGVKRQEDFIGIHFFSPVDKMPLVEIIKGEKTSDEALARVFDYTLAIGKTPIVVNDSRGFFTSRVIGTFVNEALAMLGEGVEPASIEQAGSQAGYPAPPLQLSDELNLELMHKIAVATRKGVEDAGG------TYQPHPAEAVVEKMIELGRSGRLKGAGFYEYADGKR--SGLWPGLR---ETF--KS--GSSQPPLQDMIDRMLFAEALETQKCLDEGVLTSTADANIGSIMGIGFPPWTGGSAQFIVGYSGPAGTGKAAFVARARELAAAYG--DRFLPPESLLS |
| 3ZWC Chain:A ((23-718)) | ------EYLRLPHSLAMIRLCNPP--VNAVSPTVIREVRNGLQKAGS-DHTVKAIVICGANGNFCAGADIHGFSAFTP---------GLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIAN--AKARVGLPEVTLGILPGARGTQLLPRVVGVPVAL-DLITSGKYLSADEALRLGILDAVVKSD-PV-EEAIKFAQK--II----D--KPIEPRRIFNKPVPSLPNM---DS----VFAEAIAKVRKQY--PGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAF-FAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQA--SAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRY-SPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQRTISKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASV------GLPTVLEKLQKYYRQNPDIPQLEPSDYLR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290338 for 5804 contacts (-50.0/contact) +
2D Compatibility (PS) -72945 + (NN) -30520 + (LL) 624
1D Compatibility (HY) -40400 + (ID) 8350
Total energy: -441929.0 ( -76.14 by residue)
QMean score : 0.531
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