Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKLQLRAVVADRRLDVEFSVSAGEVLAVLGPNGAGKSTALHVIAGLLRPDAGLVRLGDRVLTDTEAGVNVATHDRRVGLLLQDPLLFPHLSVAKNVAFGPQCRRGMFGSGRARTRASALRWLREVNAEQFADRKPRQLSGGQAQRVAIARALAAEPDVLLLDEPLTGLDVAAAAGIRSVLRSVVARSGCAVVLTTHDLLDVFTLADRVLVLESGTIAEIGPVADVLTAPRSRFGARIAGV---NLVNGTIGPDGSLRTQSGAHWYGTP----VQDLPTGHEAIAVFPPTAVAVYPEPPHGSPRNIVGLTVAEVDTRGPTVLVRGHDQPGGAPGLAACITVDAATELRVAPGSRVWFSVKAQEVALHPAPHQHASS |
| 2IT1 Chain:A ((13-356)) | -------FGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTE------LPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRK----APREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNPPMNFVEAKVEDGKLVITEKSK-LPIPKQYVEIVKETGITEVIIGFRPHDAEIVKGE-----GEGIVGEVYSFEPLGREQIVTVSVN---DSIVKVFAP----EGEHFSFGEKVTIKVKEELLVLFDKKTEKA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200415 for 2643 contacts (-75.8/contact) +
2D Compatibility (PS) -36845 + (NN) -20183 + (LL) 524
1D Compatibility (HY) -20000 + (ID) 4850
Total energy: -281769.0 ( -106.61 by residue)
QMean score : 0.419
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