Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDKLHWLAMHGVIRGIAAIGIRRGDLQARLIADPAVATDPVPFYDEVRSHGALVRNRANYLTVDHRLAHDLLRSDDFRVVSFGENLPPPLRWLERRTRGDQLHPLREPSLLAVEPPDHTRYRKTVSAVFTSRAVSALRDLVEQTAINLLDRFAEQPGIVDVVGRYCSQLPIVVISEILGVPEHDRPRVLEFGELAAPSLDIGIPWRQYLRVQQGIRGFDCWLEGHLQQLRHAPGDDLMSQLIQIAESGDNETQLDETELRAIAGLVLVAGFETTVNLLGNGIRMLLDTPEHLATLRQHPELWPNTVEEILRLDSPVQLTA--RVACRDVEVAGVRIKRGEVVVIYLAAANRDPAVFPDPHRFDIER-PNAGRHLAFSTGRHFCLGAALARAEGEVGLRTFFDRFPDVRAAGAGSR---RDTRVLRGWSTLPVTLGPARSMVSP |
2Y5Z Chain:B ((103-415)) | --------------------------------------------------------------------------------------------------------------LLSMDPPEHSRLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAE-----EMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQ---ARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTPN--QHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPV----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185624 for 2316 contacts (-80.1/contact) +
2D Compatibility (PS) -33008 + (NN) -16360 + (LL) 8468
1D Compatibility (HY) -17600 + (ID) 5700
Total energy: -249824.0 ( -107.87 by residue)
QMean score : 0.438
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