Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALT----SPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDE-TWRGET-GEWR-FSRSGLRYRLYSYHRS
3TQ8 Chain:A ((2-161))
IITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLGKPIVMGRRTFDSIG---KPLPHRRNIVITQQKNLIIEGCDIFYSLDDALSALTKEPEVIIIGGARIFKEALPKADKMILTIINHSFE---GDVYFPEWNDKEWKITSQIKHERD--NPYPFQFLELRRL
General information:
TITO was launched using:
RESULT:
Template:
3TQ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96149 for 1128 contacts (-85.2/contact) +
2D Compatibility (PS) -16691 + (NN) -7840 + (LL) 820
1D Compatibility (HY) -15200 + (ID) 2700
Total energy: -137760.0 ( -122.13 by residue)
QMean score : 0.771
(partial model without unconserved sides chains):
PDB file :
Tito_3TQ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQ8-query.scw
PDB file :
Tito_Scwrl_3TQ8.pdb
: