Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNAPKIKVSGPVVELDGDEMTRVIWKLIKDMLILPYLDIRLDYYDLGIEHRDATDDQVTIDAAYAIKKHGVGVKCATITPDEARVEEFNLKKMWLSPNGTIRNILGGTI--FREPIVISNVPRLVPGWTKPIVIGRHAFGDQYRATNFKVDQP-GTVTLTFTPADGSAPIVHEMVSIP-EDGGVVLGMYNFKESIRDFARASFSYGLNAKWPVYLSTKNTILKAYDGMFKDEFERVYEEEFKAQFEAAGLTYEHRLIDDMVAACLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIG-----PEQDWLNSEEFLDAIADNLEKELAN
4UMX Chain:A ((3-410))-----KKISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIIC--KNIPRLVSGWVKPIIIGHHAYGDQYRATDFVVPGPGK-VEITYTPSDGTQKVTYLVHNFEEGGGVAMG-MYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKIKLA-


General information:
TITO was launched using:
RESULT:

Template: 4UMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166543 for 3229 contacts (-51.6/contact) +
2D Compatibility (PS) -42876 + (NN) -10049 + (LL) 300
1D Compatibility (HY) -40800 + (ID) 12800
Total energy: -272768.0 ( -84.47 by residue)
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_4UMX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UMX-query.scw
PDB file : Tito_Scwrl_4UMX.pdb: