Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRIDELRRAEGIDA
2R1J Chain:L ((3-67))
-TQLMGERIRARRKK------LKIRQAALGKMV-----GVSNVAISQWERSET-EPNGENLLALSKALQCSPDYLLKG------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2R1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38709 for 452 contacts (-85.6/contact) +
2D Compatibility (PS) -7109 + (NN) -2719 + (LL) 4904
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -47333.0 ( -104.72 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_2R1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R1J-query.scw
PDB file :
Tito_Scwrl_2R1J.pdb
: