Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHQRIASIGLGLTLALGGSAQAAGQLNVVSWSG----YFSPQLLEKFEKESGIRVTVDSYDSNETLLAKLKQG--GAGYDVAIPSQQFVPILVKEALLERFDPAAEPYYANLLDNLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPEELRGRINM----FDSVSEVVDMA-SLYLGIPLCSADPKQMQRVLELLKAQKPFVKTYSSKAG-SIRENLAAGEVDMSMFWGGSSMRARE-LKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPENAALTQNFLKHQSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRLADRLWTNLMR |
| 3PU5 Chain:A ((3-323)) | --------------------LADDHIYVTSSGGSFLENVRKHMAEPFEKQSGVKVTLVPGTN-PAHALKILSSRGTPPYDVAAFGGNDMYRLIRAKKLAQVDEKSVPSLADVPEKFKA----DWEGCGSLYDYSSVGIAYRPDKIQGGVKSWKEFVERT--VAGEFGKQVFFNNLSSNVRGAEVLSMFGK-IYGSGYGDIEASIATLERMKPHIFKFF-TAFNDPVVLLTSGEGAIGPGWDGRTFIAEDSTKGMVKWVDPTEGAVSSGPVMAVVKGGK-EDLAKAFMNYALGEEAQKAFCEAMYYGAVNRKVQ--YSEKLKHRLPS-IDSVQLVDTA-LLI-KNMSALLDLWNKRIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136277 for 2614 contacts (-52.1/contact) +
2D Compatibility (PS) -32997 + (NN) -16458 + (LL) 1508
1D Compatibility (HY) -7200 + (ID) 2750
Total energy: -194174.0 ( -74.28 by residue)
QMean score : 0.456
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