Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQYLDLMRHVREHGTFKSDRTGTGTYSVFG-HQMRFDLAA-GFPLVTTKKCHLKSIVHELLWFLKGSTNIAYLKEHGVSIWDEWAD------------ENGDLGPVYGYQWRSWPAPD--------GRHIDQIANLMAMLKKNPDSRRLIVSAWNPALIDEMALPPCHALFQFYVAD---------GKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPE---VKDLFDFRFEDFELVGYEAHPHIKAPVAV |
| 2AAZ Chain:A ((20-317)) | EYQYLDLIRRIINVGEVRPDRTGTGTVALFAPPSFRFSLADNTLPLLTTKRVFLRGVIAELLWFVSGCTDAKMLSSQGVGIWDGNGSKEFLEKVGLGHRREGDLGPVYGFQWRHFGAEYTDADGDYKGKGVDQLQRVIDTIKNNPTDRRIILSAWNPKDLPLMALPPCHMFCQFFVSLPPADSPGSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYRDHVEPLKTQLEREPRDFPKLKWARSKEEIGDIDGFKVEDFVVEGYKPWGKIDMKMSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AAZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210035 for 2125 contacts (-98.8/contact) +
2D Compatibility (PS) -28409 + (NN) -12638 + (LL) 0
1D Compatibility (HY) -29200 + (ID) 6200
Total energy: -286482.0 ( -134.82 by residue)
QMean score : 0.599
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