Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFRKTLLITGASSGFGQALAREALDAGHRVVGTVRSEEARSALEAVAPGQAFGRLLDVTDLAAIEPTVAAIERDIGPLDVLVNSAGYGHEGILEESPLAEMRRQFEVNLFGAVAMIQAVLPYMRRRRRGHILNITSMGGYITMPGIAYYCGSKFALEGVSEALGKEVAGLGIAVTAVAPGSFRTDWAGRSMVRSPR-TIADYDALFDPVRQARQEKSGKQPGDPRKAARAMLQAIDAENPPAHL-------LLGSDALGLVRQKLKALEEEIAAWEEVTRSTDG |
| 3M1A Chain:A ((4-273)) | --SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKG-AAYFSEENPAYAEKVGPTRQLVQG-----PGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELTEWEKVSRGTDF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126181 for 2086 contacts (-60.5/contact) +
2D Compatibility (PS) -28341 + (NN) -17066 + (LL) 1332
1D Compatibility (HY) -12400 + (ID) 5300
Total energy: -187956.0 ( -90.10 by residue)
QMean score : 0.522
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