Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGI------PEYLAQVEPALLDT--------LALGQVLEMSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG
3JVB Chain:A ((10-243))-GKTYVYD-----------NRYWKNLGGVIKNAKRRKHEEKVEREFDSLD--------KYLVAEDPFCGPGKNQKLTLFKEIRNIKPDTMKLIVNWSGKEFLRETWTRFMEDSFPIVNDQEVMDVFLVINMRSTKPNRCFRFLAQHALRYVPHEIIRIVEPSYVGN-NEYRISLATNSFEHFINKPIVYIGTDSAEDEEVLFEVSLVFKIKEFAP--DAPLFSGPAY------


General information:
TITO was launched using:
RESULT:

Template: 3JVB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3118 for 1074 contacts (-2.9/contact) +
2D Compatibility (PS) -19740 + (NN) -1740 + (LL) 1904
1D Compatibility (HY) -9600 + (ID) 1400
Total energy: -33694.0 ( -31.37 by residue)
QMean score : 0.278

(partial model without unconserved sides chains):
PDB file : Tito_3JVB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JVB-query.scw
PDB file : Tito_Scwrl_3JVB.pdb: