Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGI------PEYLAQVEPALLDT--------LALGQVLEMSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG |
3JVB Chain:A ((10-243)) | -GKTYVYD-----------NRYWKNLGGVIKNAKRRKHEEKVEREFDSLD--------KYLVAEDPFCGPGKNQKLTLFKEIRNIKPDTMKLIVNWSGKEFLRETWTRFMEDSFPIVNDQEVMDVFLVINMRSTKPNRCFRFLAQHALRYVPHEIIRIVEPSYVGN-NEYRISLATNSFEHFINKPIVYIGTDSAEDEEVLFEVSLVFKIKEFAP--DAPLFSGPAY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JVB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3118 for 1074 contacts (-2.9/contact) +
2D Compatibility (PS) -19740 + (NN) -1740 + (LL) 1904
1D Compatibility (HY) -9600 + (ID) 1400
Total energy: -33694.0 ( -31.37 by residue)
QMean score : 0.278
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