Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVDPSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRA-------WLGQAPVRVLSLPTHADRVDDAEVLSVLRQLQAAEREGPVLMHCKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP
3GXH Chain:A ((8-152))
-----------------------------------------NLQGIRALQQQAPQLLSSGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQH-KGKDVLVHCLAN-YRASAFAYLYQLK-QGQNPNMAQT-MTPWNDELAIY-PKWQALLTEVS----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GXH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76753 for 1076 contacts (-71.3/contact) +
2D Compatibility (PS) -15132 + (NN) -10759 + (LL) 6620
1D Compatibility (HY) -9200 + (ID) 1500
Total energy: -106724.0 ( -99.19 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_3GXH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GXH-query.scw
PDB file :
Tito_Scwrl_3GXH.pdb
: