Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKA-RFKKRLLGSRGAFDLNIDLEIKEAEVVALLGESGAGKSTILRILAGLEAVSSGYIEANHSVWLDTQKKIFLKPQQRKIGFVFQDYALFPHLNVYQNIAFAHPK-------DKNKIHEVLRLMRLENLSQQKIPKLSGGQAQRVALARALIAAKNLLLLDEPLNALDNALKNEVQQGLLDFIKRENLSVLLVSHDPNEITKLARTFLFLNNGVIDPNQEN-RLFSNRLLVKPLFEDENYCHYEVIPQTISLPKDCLNPTFKLDFIQNKKF |
| 3RLF Chain:A ((4-227)) | -VQLQNVTKAWGE--VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMND------TPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141893 for 1701 contacts (-83.4/contact) +
2D Compatibility (PS) -22409 + (NN) -5971 + (LL) 916
1D Compatibility (HY) -18800 + (ID) 3750
Total energy: -191907.0 ( -112.82 by residue)
QMean score : 0.458
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