Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MEILIAGGSGFLGKQIIKAALTKG--HKVAYLSRHEGKGDIFKDPRLTYIRGDITEADKIHLEDRTFDILIDCIGAIKPN----QLDELNVKATQKAVALCHKNQIPKLVYISA----NSGYSAYIKSKRKAEQIIKASGL-DYLFVRPGLMYGEERPLSIFQAKCIKLFSHLPFLGIVVQKVFPTKVVIVAEAIVTTLRKKPTQKILSIEELNNK- |
| 2BKA Chain:A ((5-235)) | EALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80215 for 1593 contacts (-50.4/contact) +
2D Compatibility (PS) -22259 + (NN) -9374 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 1900
Total energy: -116548.0 ( -73.16 by residue)
QMean score : 0.466
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