Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDGSVSDIKRGRAARNAKLASIPVGFAGRAALGLGKRL---TGKSKDEVTAELMEKAANQLFTVLGELKGGAMKVGQALSVMEAAIPDEFGEPYREALTKLQK---DAPPLPASKVHRVLDGQLGTKWRERFSSFNDTPVASASIGQVHKAIWSD------------GREVAVKIQYPGADEALRADLKTMQRMVGVLKQLSPGADVQGVVDELVERTEMELDYRLEAANQRAFAKAYHDHPRFQVPHVVASAPKVVIQEWIEGVPMAEIIRHGTTEQRDLIGTLLAELTF--DAPRRLGLMHG-DAHPGNFMLLPDGRMGIIDFGAVAPMPGGFPIELGMTIRLAREKNYDLLLPTMEKAGLIQRGRQVSVREIDEMLRQYVEPIQVEVFHYTRKWLQKMTVSQIDRSVAQIRTARQMDLPAKLAIPMRVIASVGAILCQLDAHVPIKALSEELIPGFAEPDAIVV |
| 4WZI Chain:A ((85-576)) | VTPFAQVLASLRSVRNNFTIQKLAMETLEELDWALDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRCGNQVSEYISNTF--LDKENEDHLAKELEDLNKWGLNIFNVAGYSHNRPLTAIMYAIFQER-DLLKTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNS------------ELALMYND-ESVLENHHLAVGFKLLQEEH------ADIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDN----------------------YTDRIQVLRNMVHAADLSNPTKS------LELYRQWTDRIMEEFFQQGDKERERG--MEISPMADKHTACVEKSQVGFIDYIVHPLWETWADLVQPDA----QDILDTLEDNRNWYQAMIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51663 for 2813 contacts (-18.4/contact) +
2D Compatibility (PS) -40490 + (NN) -5614 + (LL) 4484
1D Compatibility (HY) -11600 + (ID) 3100
Total energy: -107983.0 ( -38.39 by residue)
QMean score : 0.230
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