Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLRSLASPAALTDPKRCASVVGVAAFAVRREHAPDALGGPPGL-PAPRGFRAAFAAAYAVAYL-AGGERRMLRLIRRYGPIMTMPILSLGDVAIVSDSALAKEVFTAPTDVLLGGEGVGPAAAIYGSGSMFVQEEPEHLRRRKLLTPPLHGAAL--DRYVPIIENSTRAAMHTWPV--DRPFAMLTVARSLMLDVIVKVIFGVDDPEEVRRLGRPFERLLNL---GVS----E-QLTVRYALRRLGALRVWPARARANTEIDDVVMALIAQRRADPRLGERHDVLSLLVSARGE----SGEQLSDSEIRDDLITLVLAGHETTATTLAWAFDLLLHHPDALRRVRAEAVGG-------------GEAFTTAVINETLRVRPPAPLT-ARVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVYEHPHEFRPERFLGTRP---QTYAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEFTAVDDEPER-IV--RRSIMLVPRRGTRVRFRPAR |
| 3E6I Chain:A ((10-471)) | --------------------------------------KLPPGPFPLPIIGNLFQ-------LELKNIPKSFTRLAQRFGPVFTLYVGS-QRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFH-AHRDRGIIFNNGPTWKDIRRFSLTTLRNYG-GKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSF-LHYL-P-GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPP-RYKLCVIPR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230975 for 3468 contacts (-66.6/contact) +
2D Compatibility (PS) -45227 + (NN) -24115 + (LL) 5040
1D Compatibility (HY) -14000 + (ID) 3700
Total energy: -312977.0 ( -90.25 by residue)
QMean score : 0.415
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