Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ--IREMNPNYTEFKFPQIKAH-PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANTGDRGQTNNAASASASNST |
3ZDU Chain:A ((4-289)) | ------------------------------------------------------MYETLGKVGEGSYGTVMKCKHKNTGQIVAIKIFY--NKIAMREIKFLKQFHHENLVNLIEVFRQK----KKI--HLVFEFIDHTVLD---ELQHYCHGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQ-SGITKLCDFGFART----DIYDDEVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQHPKNARKK-YPKLNGLLADIVHACLQIDPADRISSSDLLHHEYFTR------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159999 for 2159 contacts (-74.1/contact) +
2D Compatibility (PS) -29185 + (NN) -16695 + (LL) 5708
1D Compatibility (HY) -23600 + (ID) 3950
Total energy: -227721.0 ( -105.48 by residue)
QMean score : 0.614
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