Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAMTAGTTTTFPMSNHTRERVTVAKLTLENFYSNLILQHEERETRQKKLEVAMEEEGLADEEKKLRRSQHARKETEFLRLKRTRLGLDDFESLKVIGRG-AFGEVRLVQKKDT-GHIYAMKILRKSDMLEKEQVAHIRAERDILV--EADGAWVVKMFYSFQDKR-NLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYISETVLAIDAIH-QLGFIHRDIKPDNLLLDAK-GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYEMLIGY-PPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCIDSENRIGNSGVEEI----KGHPFFEGVDWEHIRERPAAIPIEIKSIDDTSNFDDFPESDILQPVPNTTEPDYKSKDWVFLN--YTYKRFEGLTQRGSIPTYMKAGKL----------- |
| 1CDK Chain:A ((8-350)) | ----------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--LDQFERIKTLGT-GSFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--G--RT---------------------------------WTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAG-YPPFFAD-------QPIQIYEKIVSGKVRFPS--------------------------HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA-------TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI------NEKCGKEFSEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120545 for 2458 contacts (-49.0/contact) +
2D Compatibility (PS) -33371 + (NN) -11004 + (LL) 9556
1D Compatibility (HY) -24400 + (ID) 4700
Total energy: -184464.0 ( -75.05 by residue)
QMean score : 0.349
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