Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDVIISGGGLLGLITAVGLSNNSVSVAVIEKNNLPRIIDDNRAFAISQGSRKILEKLGIWQFIESEAEPILDICILDENSPITVHYNHKMVSEEPMGYVINSTVIWNAINNNFLNKLNIYSL--HSYRTITCDAGYVEVTLGNNQKLISSLLICAEGKNSKLPGLFSMSIIKFDYKQSSIVFNVKHELH-H-Q-----NLAVEQFFPGGPFAILPMKSGY-------TSSIVWTEKSEI-SKMLMN-L-S---E---------EEFIIELKKRFGSYLGEV-KLD---GERKSYPLSFASAKKLYKSRVLLIGDAAHSIHPVAGQGLNLGIRDAESVVRQITAAKAFGIDVGSSYLLKKISRDRCLDNFTMALATDGLNRIFSNRIFCAKTLRNFGLMAVENSKFLKKRFIRHAMGFV |
| 2VOU Chain:A ((5-365)) | -TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP-LSGFGTGIVVQPELVHYLLEQGVELD--SISVPSSSMEYVDALTGE-RVGS---VP-A-DWRFTSYDSIYGGLYELFG---PERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVVRKRLLGI-EPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKPFRDLVLNASSPFVTVVADATVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN----HDL--RGSLQSWETRQLQQGHAYLNKVKKMASRLQHGGSFEPGNPAFAFGLPKVDEPSVV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159442 for 2666 contacts (-59.8/contact) +
2D Compatibility (PS) -34975 + (NN) -6511 + (LL) 2244
1D Compatibility (HY) -4000 + (ID) 2550
Total energy: -205234.0 ( -76.98 by residue)
QMean score : 0.373
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