Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMQQLSLKHRLNNGDSVYGIFNSIPDPLMIEVIAASGYDFVVIDTEHVAINDETLAHLIRAAEAAHIIPIVRVTAVIDRDIIKVLDMGARGIIVPHVKDRETVEHIVKLSRYYPQGLRSLNGGRMARFGRTPLLDAMEMANEHIMVIAMIEDVEGVMAIDDIAQVEGLDMIVEGAADLSQSLGIPWQTRDDQVTSHVQHIFEVVNAHGKHFCALPREDEDIAKWQAQGVQTFILGDDRGKIYRHLSASLATSKQKGDDG
1DXE Chain:A ((4-256))
DVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVA-DYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK-----
General information:
TITO was launched using:
RESULT:
Template:
1DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181217 for 2104 contacts (-86.1/contact) +
2D Compatibility (PS) -27197 + (NN) -10576 + (LL) -256
1D Compatibility (HY) -6800 + (ID) 3500
Total energy: -229546.0 ( -109.10 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_1DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DXE-query.scw
PDB file :
Tito_Scwrl_1DXE.pdb
: