Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRLNSIIIEAADKARV----------PA--GGALAVDRHDFSGYITETLKNHENITVINEEI------------------NAIPDGYTIIATGPLTTE-------TLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSRYDKG-EAAYLNCPMT-EDEFNRFYDAVLEAEVAP--VNSFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFP-RETMIGSMAYYISHAKN----------------------NKNFQPMNANFGLLPSLE-TRIKDKKERYEAQANRALDYLENFKKTL |
| 3CES Chain:A ((5-471)) | DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNID---------TLGQMSCNPAIGGI----GKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGSIPLSRRLR-ELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQ-VPCYITHTNEKTHDVIRSNLDRS------PSIED------KVMRF-------------ADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFD-PRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138395 for 3277 contacts (-42.2/contact) +
2D Compatibility (PS) -39295 + (NN) -8454 + (LL) 3152
1D Compatibility (HY) -8800 + (ID) 3950
Total energy: -195742.0 ( -59.73 by residue)
QMean score : 0.429
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