Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLSPEYLLSRDYLEDDPEGFINFCHKRLLFVD-TKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAG--SQHVDELHGTLNRFYCNAC-----HKSYTKSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFK--GDNLIIINKDRTPYDSDA-----TLVIHDDMVSVVKSLMTE------ |
1ICI Chain:A ((1-256)) | GSHHHHHHGSHMD-EKLLKTIAESKYLVALTGAGVSAESGIPTFR---GKDGLWNRY--RPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGSR--NVIHLHGSLRVVRCTS-CNNSFEVESAP-KIP--PLPKCDKCGSLLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDE----TP-LTPIADYSLRGKAGEVMDELVRHVRKALS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ICI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125225 for 1854 contacts (-67.5/contact) +
2D Compatibility (PS) -24337 + (NN) -8312 + (LL) 404
1D Compatibility (HY) -12400 + (ID) 4100
Total energy: -173970.0 ( -93.83 by residue)
QMean score : 0.466
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