Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPK---STRTITPSFTS------NGFGMPDMNAISMDTSPAFTFNEEHISG----ETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDYNF-PKKP-FKYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFN-NGQYHISFDSGQSVHTPHEPILATGFDATKNPI-VQQ-LFVTTN-QDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 1GES Chain:A ((3-328)) | -KHYDYIAIGGGSGGIASINRAAMYGQ-KCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFD---T----TINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGF-ARFVDA----KTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPA-LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-SFD------PMISETLVEVMNAE-GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETV-DCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQN-TNIEGIYAVGDNTGAVE----LTPVAVAAGRRLSERLFNN-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173861 for 2481 contacts (-70.1/contact) +
2D Compatibility (PS) -33367 + (NN) -14621 + (LL) 3644
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -230555.0 ( -92.93 by residue)
QMean score : 0.388
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