Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRQLGNAGLVTSELGFGCMGLNYHRGPAKDRNEMIEVVRTAMDAGITMFDTAEVYGPYTNEELVGEALVG---KRNHVQIATKGGFKINGLNNEVDSRPESIKAAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLSEASAKTIRRAHKV------EPLAAVESEYSIWWREAE-KEVFPVLEELGIGLVAYSPLGRGYLTGKLDINADFNANDNRG----GLPRFQKEAMEANQVLLDFMKEIADEQNVTTAQLALAWILDQKPWIVPIPGTTRPSRIEENIASTEI--HFDDGARQKIADALSQIEIVGDRYSAAENKRIGK |
| 3EAU Chain:A ((3-324)) | QFYRNLGKSGLRVSCLGLGTWVTFG---GQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKA-ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107489 for 2661 contacts (-40.4/contact) +
2D Compatibility (PS) -32523 + (NN) -11939 + (LL) 1136
1D Compatibility (HY) -14000 + (ID) 4000
Total energy: -168815.0 ( -63.44 by residue)
QMean score : 0.467
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