Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELNKFVGNKI-KQYREERGLNQEALAEKLHTTRQTISRYENGDRKANQDVLFELAKIFNKRLDDFFPERNLPPVDERLVTIAAHIDDDVTEEEMRDILAYIEMKKKLHRGM
2EBY Chain:A ((8-107))
---PTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWE-------VENNMRTQEELGRIETVAEYLARREE--
General information:
TITO was launched using:
RESULT:
Template:
2EBY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6634 for 628 contacts (-10.6/contact) +
2D Compatibility (PS) -10649 + (NN) -2876 + (LL) 1536
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -24323.0 ( -38.73 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_2EBY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EBY-query.scw
PDB file :
Tito_Scwrl_2EBY.pdb
: