Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MTIQWFPGHMAKARREVTE-KLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIIL-------NKADTADEK--------TTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIRA------MILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFEDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLENHYPDRLQTWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLG-RMSFDFPNWEDEVE------ |
| 2QTH Chain:A ((1-355)) | MKTAALFVSKEFEEEAIALVEGANYKVTSIYKLPKSPNVKFYIQYDKLQQIKNDEEISTLIIFEQLKPRHFINIRRELKGKEVLDKILLLLEIFALHAGSKEAKMQIELARLKYELPIIKETSTIKFYKRRINKLMKELESIKIIPSIGIVGYTNSGKTSLFNSLT--------GLMSPKRYAIPIN-NRKIMLVDTVGFIRGIPPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVTLNKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELLRDKIYQLATQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2054 for 2081 contacts (1.0/contact) +
2D Compatibility (PS) -29622 + (NN) -2092 + (LL) 568
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -36642.0 ( -17.61 by residue)
QMean score : 0.220
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