Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MERNEVLKKVEAAMPNARFKHTLGVEKAAVELAEHYHM----DVEKARITALLHDYAKYYDDDKARKIIE--------DEGYD-PRLLSFHHSLWHAPVGAYLAEKEFGITDTEILEAIRLHTTGSA--TMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY |
3MEM Chain:A ((277-407)) | ---------------VDYWQQAIWQAQSAGILASMMPRGQRPLFGLAYLAGLLHNFGHLVLAQVFPPHFKLVCRSLEVSPHIDSSVIEHYLLGITREQIAAQLMEN-WGMP-DEVTLAIRYQKNPAYDGPHNVYARLLWLGRQLLTER---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32768 for 875 contacts (-37.4/contact) +
2D Compatibility (PS) -12587 + (NN) -5557 + (LL) 6020
1D Compatibility (HY) -7200 + (ID) 950
Total energy: -53042.0 ( -60.62 by residue)
QMean score : 0.509
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