Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK |
2VXN Chain:A ((3-250)) | AKPQPIAAANWKCNGTTASIEKLVQVFNEHTI-SHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNAI-AKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAANAATLYAKPDINGFLVGGASLKPE-FRDIIDATR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VXN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109825 for 2144 contacts (-51.2/contact) +
2D Compatibility (PS) -27468 + (NN) -16046 + (LL) 76
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -175563.0 ( -81.89 by residue)
QMean score : 0.602
|
|
|