Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
2UZH Chain:A ((5-159))
LPRVGLGTDVHPIEAGRPCRLLCLEFDDADGCA--SDGDVAAHALCDALLSAAGLGDLGTIFGTDRPQWRGASGADMIRHVRGLVENAGFVIGNATVQVIGNRPKVGPRREEAQQVLSELVGA---PVSVSATTTDGLGLTGRGEGLAAIATALVAAE
General information:
TITO was launched using:
RESULT:
Template:
2UZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118011 for 1265 contacts (-93.3/contact) +
2D Compatibility (PS) -16555 + (NN) -10457 + (LL) -40
1D Compatibility (HY) -8000 + (ID) 3000
Total energy: -156063.0 ( -123.37 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2UZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UZH-query.scw
PDB file :
Tito_Scwrl_2UZH.pdb
: