Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKIGVSLIVLIMLIIFLAGCNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQLMNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL--------
2JQO Chain:A ((1-108))--------------------MNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQLMNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELLLEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 2JQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 422 -49108 -116.37 -491.08
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -116.37
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.596

(partial model without unconserved sides chains):
PDB file : Tito_2JQO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JQO-query.scw
PDB file : Tito_Scwrl_2JQO.pdb: