Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDHKVPFNRPYMTGR--ELAYIAEAHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNVISGEGGALLVNS
2PO3 Chain:A ((20-213))
----PLLVGRPNRIDRARLYERLDRALDSQWLSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAA--GLTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVHLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTD-
General information:
TITO was launched using:
RESULT:
Template:
2PO3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106136 for 1558 contacts (-68.1/contact) +
2D Compatibility (PS) -20956 + (NN) -9964 + (LL) 248
1D Compatibility (HY) -7200 + (ID) 3550
Total energy: -147558.0 ( -94.71 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_2PO3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PO3-query.scw
PDB file :
Tito_Scwrl_2PO3.pdb
: