Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTSHGFSRAAVVGAGLMGRRIAGVLASAGLDVAITDTNAEILHAAAVEAARVAG------------AGRGSVAAAADLAAAIPDADLVIEAVVENLAVKQELFERLATLA-PDAVLATNTSVLPIGAVTERVEDGSRVIGTHFWNPPDLIPVVEVVPSARTAPDTADRVVALLTQVGKLPVRVGRDVPGFIGNRLQHALWREAIALVAEGVCDPKTVDLVVRNTIGLRLATLGPLENADYIGLDLTLAIHDAVIPS-L-----NH-D----PHPSPLLRELVAAGQLGARTGHGFLDWPAGAREATTARLAQHIAAQLQANEKGRGT |
3ZWC Chain:A ((313-605)) | ---AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVV-GNCYGFVGNRMLAPYYNQGFFLLEEG-SKPEDVDGVLE-EFGFKM---GPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPL------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125472 for 2138 contacts (-58.7/contact) +
2D Compatibility (PS) -30273 + (NN) -17224 + (LL) 3020
1D Compatibility (HY) -22000 + (ID) 4150
Total energy: -196099.0 ( -91.72 by residue)
QMean score : 0.485
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