Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDKLHWLAMHGVIRGIAAIGIRRGDLQARL--IADPAVATDPVPFYDEVRSHGALVRNRANYLTVDHRLAHDLLRSDDFRVVSFGENLPPPLRWLERRTRGDQLHPLREPSLLAV--------EPPDHTRYRKTVSAVFTSRAVSALRDLVEQTAINLLDRFAEQ-PGIVDVVGRYCSQLPIVVISEILGVPEHDRPRVLEFGELAAPSLDIGIPWRQYLRVQQGIRGFDCWLEGHLQQLRHAPGDDLMSQLIQIAESGDNETQLDETELRAIAGLVLVAGFETTVNLLGNGIRMLLDTPEHLATLRQ-HPELWPNTVEEILRLDSPVQ-LTARVACRDVEVAG-VRIKRGEVVVIYLAAANRDPAVFPDPHRFDIERP-NAGRHLAFSTGRHFCLGAALARAEGEVGLRTFFDRFPDVRAAGAGSRRDTRVLRGW------STLPVTLGPARSMVSP |
| 1JIP Chain:A ((1-403)) | ---------------T-TVP-DLESDSFHV-DW--YRTYAELRET--APVTPVRFL-G-QDAWLVTGYDEAKAALS--DL-RLSSDPKKKYP---GVEVEFPAYLGFPEDVRNYFATNMGTSDP--PTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVG--DSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEFGRWSSE-ILVM-D---PERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIR-V-QDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRD-PSALPNAVEEILRYIAPPETT-TRFAAEEVEIG-GVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT-R-GHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDAD--DVVWRRSLLLRGIDH-LPVRLD--G----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221567 for 3031 contacts (-73.1/contact) +
2D Compatibility (PS) -40701 + (NN) -15728 + (LL) 3440
1D Compatibility (HY) -20800 + (ID) 6850
Total energy: -302206.0 ( -99.71 by residue)
QMean score : 0.447
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