Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTG-VPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVLA |
3LEZ Chain:A ((3-258)) | ---------------------------------------------EDLKKLEEEFDVRLGVYAIDTGADKEISYRENERFAYTSTFKPLAVGAVLQTKSDEELEETITYSEEDLVTYSPITEQHVDEGMTLVEIADAAIRYSDNTAGNLLLEAMGGP----DELETILRDIGDETIEMDRYETELNEAKPGDIRDTSTAKAMATTLQQYVLEDVLDADRREVLTNMLINNTTGDALIRAGVPDGWTVGDKTGAGGYGTRNDIGIIWPEGDEEPIVIAIMSSRD--EEDADYDDKLIEKATEIVLQEL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130696 for 2307 contacts (-56.7/contact) +
2D Compatibility (PS) -28058 + (NN) -18858 + (LL) 2424
1D Compatibility (HY) -20800 + (ID) 5850
Total energy: -201838.0 ( -87.49 by residue)
QMean score : 0.547
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