Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIRWHIQLGNIVIPKSVNPMRIASNFDAFDFPRSMTEPGLVRIRKPSISQA-GEMT
2BGS Chain:A ((268-323))
VLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTGEE-
General information:
TITO was launched using:
RESULT:
Template:
2BGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5580 for 250 contacts (-22.3/contact) +
2D Compatibility (PS) -5755 + (NN) -717 + (LL) 52
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -14850.0 ( -59.40 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_2BGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BGS-query.scw
PDB file :
Tito_Scwrl_2BGS.pdb
: