Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
1O3T Chain:A ((2-200))
----------PTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE---EGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG--
General information:
TITO was launched using:
RESULT:
Template:
1O3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128241 for 1430 contacts (-89.7/contact) +
2D Compatibility (PS) -21055 + (NN) -661 + (LL) 1144
1D Compatibility (HY) -24400 + (ID) 6550
Total energy: -179763.0 ( -125.71 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1O3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O3T-query.scw
PDB file :
Tito_Scwrl_1O3T.pdb
: