Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPLIGQLYRNNNVVTSIHGRGLINRSVIAIMKAHRFARHRMADDAELSVHETFPILKAMSELKLGAASVDLGKMVAKFKAEGNGRSIEDFVKAELAEVVGKQNGDAREGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLVKRASLLRRDSVHGPFDGTITIDEENNTLTANGNLIQVIYSNDPASIDYTQYGIKNALLVDNTGKWRDAEGLGQHLKCPGIDRVVLTAPGKGALKNIVHGINHTDIGADDKIISAASCTTNAIVPVLKAVNDQYGIVNGHVETVHSYTNDQNLIDNFHKGSRRGRSAPLNMVITETGAATAAAKALPVLKGKLTGNAIRVPTPNVSMAILNLNLEKATTREEINEYLRQMAMHSDLQKQIDFVSSQEVVSTDFVGSRHAGVVDAEATIC-NDNRVVLYVWYDNEFGYSCQVVRVMEDMAGVNPPAFPR |
| 3DOC Chain:A ((1-334)) | ------------------------------------------------------------------------------------------------------------MAVRVAINGFGRIGRNILRAIVES--GRTDIQVVAINDLG----PVETNAHLLRYDSVHGRFPKEVEV--AGDTIDVGYGPIKVHAVRNPAELPWKEENVD--IALECTGIFTSRDKAALHLEA-GAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTPNVSVVDLTFIAKRETTVEEVNNAIREAA-NGRLKGILGYTD-EKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDNEWGFSSRMSDTAVALGKL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224385 for 2903 contacts (-77.3/contact) +
2D Compatibility (PS) -36924 + (NN) -19199 + (LL) 8064
1D Compatibility (HY) -18000 + (ID) 6050
Total energy: -296494.0 ( -102.13 by residue)
QMean score : 0.542
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