Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARRRVLVMDTGLRRNRFA--RASHGFLGQDGRDPAAIADDARAQLLAYPSVEWLSEAAVAAKKEADGFVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIGVLAASPLAIHHALMLPDWGA-TTFFLNGVF--EPDAEQMSRLDRRGVTIERE-AVVALGGAR--ADVTL---AS--GRTITLAGLFTQPRTRMASPLAALLGCEFEDGPSGPFIRTDGMRETSVPGVFACGDAALA---AGNVAIAVGDGARTGGAAHHSLLFR |
| 3F8D Chain:A ((10-318)) | -----------VKPGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGETP-GGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENR--EFV-VKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDT--NG-YIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210227 for 2508 contacts (-83.8/contact) +
2D Compatibility (PS) -30836 + (NN) -7085 + (LL) 892
1D Compatibility (HY) -11200 + (ID) 3200
Total energy: -261656.0 ( -104.33 by residue)
QMean score : 0.407
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