Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVG--GVIAGWVEALQLMNAGSKWRLHVPSELAYGGQAV-GSIPPHSVLVFDVELLEIL |
3UF8 Chain:A ((82-209)) | ------------------------------------------------------------------------------EDNDIIEAHREQIGG-STVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56183 for 890 contacts (-63.1/contact) +
2D Compatibility (PS) -13087 + (NN) 434 + (LL) 5748
1D Compatibility (HY) -5600 + (ID) 2550
Total energy: -71238.0 ( -80.04 by residue)
QMean score : 0.517
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