Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGI----PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM-AHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKESL |
| 3AV7 Chain:A ((52-446)) | ----RFFSKKALEMRASEVRELLKLVE--TSDIISLAGGLPNPKTFP-KEIIRDI----LVEIMEKYADKALQYGTTKGFTPLRETLMKWLGK-----------RYGISQDN-DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKK------VKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYV----DGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKML-ERAIKKGVAYVPGEAFYAHRDVKNT-MRLNFTYVDEDKIMEGIKRLAETIKEEL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -252972 for 3369 contacts (-75.1/contact) +
2D Compatibility (PS) -41605 + (NN) -21255 + (LL) 1492
1D Compatibility (HY) -34400 + (ID) 6400
Total energy: -355140.0 ( -105.41 by residue)
QMean score : 0.386
|
|
|