Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGVSEGTRGCSDRQPGVLTRDRSCSRKMNSSGCLSEEVGSLRPLTVVILSASIVVGVLGNGLVLWMTVFRMAR-TVSTVCFFHLALADFMLSLSLP-IAMYYIVSRQWLLGEWACKLYITFVFLSYFASNCLLVFISVDRCISVLYPVWALNHRTVQRASWLAFGVWLLAAALCSAHLKFRTT--RKWNGCTHCYLAFNSDNETAQIWIEGVVEGHIIGTIGHFLLGFLGPLAIIGTCAHLI-RA----------------------------------KLLREGWV------------HANRPKR-----LLLVLVSAFFIFWSPFNVVLLVHLWRRVMLKE----IYHPRMLLILQASFALGCVNSSLNPFLYVFVGRDFQEKFFQSLTSALARAFGEEEFLSSCPRGNAPRE |
| 4XNV Chain:A ((62-382)) | ------------------------------------------------------IIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRK-NKTITCY------DTTSDEYLRSYFIYSMCTTVAMFCV----PLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDI----VCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -240014 for 1850 contacts (-129.7/contact) +
2D Compatibility (PS) -25717 + (NN) -5417 + (LL) 4852
1D Compatibility (HY) -31200 + (ID) 4050
Total energy: -301546.0 ( -163.00 by residue)
QMean score : 0.275
|
|
|